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1. metabase-genomics-dashboard metabase-genomics-dashboard Public

   Python toolkit for programmatically creating Metabase dashboards for genomic rare variant datasets

   Python

2. rare-variant-discovery-pipeline rare-variant-discovery-pipeline Public

   WDL

3. wgs-sv-ensemble-pipeline wgs-sv-ensemble-pipeline Public

   WDL

4. GATK_gCNV_pipeline GATK_gCNV_pipeline Public

   This repository contains scripts and resources for Copy Number Variant (CNV) analysis on and Interstitial Cystitis Cohort (n=425) using the Genome Analysis Toolkit's germline CNV (GATK-gCNV) pipeli…

   Python 2 1

5. sequencing_pipe sequencing_pipe Public

   IGM Variant calling pipeline

   C++