Automated omics-scale protein modeling and simulation setup.

An automated pipeline for homology-modeling based on modeller

This is a repository of Modeller automation(Linux version), which will help us to develop exclusive codes for Bioinformatics. We are curious Computer Science people, who are exploring Bioinformatics, This project is also a part of that voyage.

AlphaMod's official repository for protein folding

Generating PDB Structure Models via Modeller-Python

Jython/Java extensions processed through IBM/SPSS Modeler

Coverability graph modeller

A Python-based comparative modeling workflow using MODELLER to build homology models from a target FASTA and template PDB, with comparison against a Swiss-Model structure.

A Python script that compares predicted protein structures (AlphaFold2, MODELLER, RoseTTAFold) against an experimental reference for a single target, reporting quality/fit metrics.

Assess models previously generated with modeller with the DOPE method

Tools for personal use. Feel free to use/modify.

Homology Modelling of the human cryptochrome-1 using mouse cryptochrome-1

Bioinformatics Course - Protein Module Practice

EasyModel: a user-friendly web-based interface based on MODELLER

A script to generate a tripeptide database. At present, the amino acids of tripeptides produced are not complete

🧬 Lectures for course ML-protein-design

基于modeller官网脚本进行开发的序列比对脚本