allele-calling

Here are 2 public repositories matching this topic...

B-UMMI / chewBBACA

BSR-Based Allele Calling Algorithm

bioinformatics genomics mlst bacteria cgmlst outbreak-detection wgmlst bacterial-genome-analysis allele-calling bacterial-typing

Updated Feb 2, 2026
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liora-bioinformatics / PhyloTrace

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PhyloTrace is a GUI platform for bacterial monitoring offering a toolkit of analyses like hashed cgMLST typing and Antimicrobial Resistance Screening.

phylogenetic-trees epidemiology genetic-analysis infectious-diseases cgmlst bacterial-genomes antimicrobial-resistance allele-calling bacterial-typing

Updated Feb 25, 2026
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