Singapore Lipidomics Incubator (SLING)

All

32 repositories

MRMhub
Public
A toolkit for processing targeted small molecule mass spectrometry data
quality-control metabolomics mass-spectrometry lc-ms data-processing lipidomics small-molecules peak-identification peak-integration
R
•
Other
•0•5•0•0•Updated Feb 27, 2026Feb 27, 2026
mrmhub-workflows
Public
TeX
•0•1•0•0•Updated Nov 24, 2025Nov 24, 2025
midar
Public
Small Molecule Mass Spectrometry Data Post-Processing, Quality Control, Exploration and Reporting
r metabolomics mass-spectrometry quantitative lipidomics data-post-processing
R
•
BSD 3-Clause "New" or "Revised" License
•2•7•0•0•Updated Oct 2, 2025Oct 2, 2025
PHM5002
Public
Jupyter Notebook
•
MIT License
•0•1•0•0•Updated Sep 16, 2025Sep 16, 2025
MASLD_dual_omics
Public
R
•0•1•0•0•Updated Sep 13, 2025Sep 13, 2025
MetaboKit
Public
Python
•
BSD 3-Clause "New" or "Revised" License
•5•9•0•0•Updated Aug 19, 2025Aug 19, 2025
StratiRandom_Shiny
Public
R
•0•0•0•0•Updated May 7, 2025May 7, 2025
RQCee
Public
Response curve analysis app
R
•0•0•0•0•Updated Apr 24, 2025Apr 24, 2025
CDM5104_Lipidomics
Public
TeX
•0•1•0•0•Updated Feb 18, 2025Feb 18, 2025
RFkit
Public
A Tool for Processing Ultrahigh-throughput Targeted Analysis Files acquired from Agilent Technologies RapidFire system coupled to MS (QQQ)
Python
•
BSD 3-Clause "New" or "Revised" License
•0•2•0•0•Updated Dec 4, 2024Dec 4, 2024
sling-data-workshop-2024
Public
HTML
•
MIT License
•1•1•0•0•Updated Oct 29, 2024Oct 29, 2024
rqcViewer
Public
R
•0•0•0•0•Updated Sep 23, 2024Sep 23, 2024
Burla_2024_FabryLipidomics
Public
R
•
MIT License
•0•1•0•0•Updated Jun 13, 2024Jun 13, 2024
LICAR
Public
Isotopic interference correction for class-based separation LC-MRM-MS lipidomics data
r shiny lipidomics isotope-correction massspectrometry
R
•
MIT License
•4•4•1•0•Updated Apr 1, 2024Apr 1, 2024
iSLS12_2024
Public
0•0•0•0•Updated Mar 2, 2024Mar 2, 2024
authorlistR
Public
JavaScript
•
MIT License
•0•0•0•0•Updated Nov 8, 2023Nov 8, 2023
lancer
Public
Linearity Assessment and Curve Explorer
R
•
Other
•0•3•0•0•Updated Oct 17, 2023Oct 17, 2023
SLING_ResearchUpdate_Q3_2023
Public
HTML
•0•0•0•0•Updated Sep 12, 2023Sep 12, 2023
StratiRandom
Public
R script and Shiny app to perform stratified randomisation
randomization lc-ms batch-effects cohort-studies
R
•
MIT License
•0•1•0•0•Updated Aug 28, 2023Aug 28, 2023
rbasel2023
Public
R/Basel 2023 talk
HTML
•0•0•0•0•Updated Jul 21, 2023Jul 21, 2023
Talk_SLING_RU2023Q2
Public
CSS
•0•0•0•0•Updated Jun 22, 2023Jun 22, 2023
iSLS11
Public
Scripts and notes used in the iSLS11 workshop on data analysis
processing data r analysis spectrometry lipidomics mass biological-variability
HTML
•
MIT License
•0•1•0•0•Updated Jun 9, 2023Jun 9, 2023
SLINGtools
Public
Facilitate lipidomics data analysis in R
r lipidomics
R
•
Other
•0•0•0•0•Updated Apr 20, 2023Apr 20, 2023
MSTemplate_Creator
Public
An excel macro file to provide users a more friendly interface to create annotation files from MRM transition names data.
VBA
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MIT License
•0•0•0•0•Updated Apr 18, 2023Apr 18, 2023
RwithSLING
Public
RwithSLING notes
r lipidomics
TeX
•
Other
•0•0•0•0•Updated Sep 29, 2022Sep 29, 2022
MSOrganiser
Public
A standalone Windows executable software that extracts and organizes MRM transition names data in a few button clicks.
Python
•
MIT License
•0•1•0•0•Updated Sep 8, 2022Sep 8, 2022
explore
Public
HTML
•
MIT License
•0•0•0•0•Updated Jun 7, 2022Jun 7, 2022
iSLS10
Public
iSLS10 data analysis workshop
r workshop lipidomics dataanalysis isls10
R
•
MIT License
•2•2•0•0•Updated Mar 9, 2022Mar 9, 2022
iSLS9
Public archive
iSLS9 data analysis workshop
r lipidomics dataanalysis
R
•
MIT License
•1•1•0•0•Updated Mar 8, 2021Mar 8, 2021
MRMtraceClust
Public
Functions to handle MRM data stored in mzML files
r mrm lcms
R
•
MIT License
•0•0•0•0•Updated Feb 17, 2021Feb 17, 2021