OMERO import: attach parameters.txt and log.txt as FileAnnotation#3
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sukunis wants to merge 1 commit intoaarpon:develfrom
Open
OMERO import: attach parameters.txt and log.txt as FileAnnotation#3sukunis wants to merge 1 commit intoaarpon:develfrom
sukunis wants to merge 1 commit intoaarpon:develfrom
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Dear @sukunis, thanks a lot for your PR! This is something I had on my own list of improvements, but I never got around to really work on it. As you could see from the comments this had been stuck initially for some lack of information from OMERO, but this has been fixed a while ago upstream. The other thing I had been thinking about is to actually parse the HRM output and place the results into OMERO.tables or key-value pairs... I will look into your PR more detailed hopefully later this month, unfortunately my schedule is terribly busy at the minute. So please be patient with me! Best, |
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Dear Aaron,
how it works:
to get the ID of the imported image i parse the output of the cli.invoke command. After a reconnection (cli.invoke seems to cut the connection after excecution) i attach the files to this object.
Regards
Susanne