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Added Example and fixed documentation #8

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@DonaldChung-HK DonaldChung-HK commented Aug 10, 2022

Description

Provide a brief description of the PR's purpose here.

Todos

Notable points that this PR has either accomplished or will accomplish.

  • TODO 1

Questions

  • Question1

Status

  • Ready to go

DonaldChung-HK and others added 28 commits July 1, 2022 13:46
@DonaldChung-HK
update readme for CCP Biosim
14081e8
@DonaldChung-HK
testing CI and remove method 3 and 4
e638263
@DonaldChung-HK
Merge pull request #1 from DonaldChung-HK/main
de42f07 
Update README.md
@DonaldChung-HK
Fast forwarded
8795f3a
@DonaldChung-HK
See if new line make list show in Readthedocs
56ef539
@DonaldChung-HK
testing setup.py changes
1aa9f1b
@DonaldChung-HK
testing setup.py changes
725e2c2
@DonaldChung-HK
Merge branch 'main' of https://github.com/CCPBioSim/CodeEntropy into …
22bbfda 
…main
@DonaldChung-HK
fixed classifier
cb4f950
@DonaldChung-HK
exclude full lysozyme trajectory in build
4c89151
@DonaldChung-HK
add github action to test build and upload to pypi if tagged
fae055f
@DonaldChung-HK
update docs to us pypi
609fc94
@DonaldChung-HK
change publish to run only if passed test
ddcdb92
@DonaldChung-HK
removed artifact
74a7903
@DonaldChung-HK
0.3.6 test
944441c
@DonaldChung-HK
remove publish github action
29fe032
@DonaldChung-HK
fixed readme.md and updated topog method
9a123b8
@DonaldChung-HK
added build action, excluded test trajectory from build and freeze de…
a9183b5 
…pendency
@DonaldChung-HK
added paper
0f4b52f
@DonaldChung-HK
removed auto paper build
003b32d
@DonaldChung-HK
added draft of paper
aae7841
@DonaldChung-HK
added multi processing but not officially supported due to low perfor…
eaf094a 
…mance
@DonaldChung-HK
Removed dask implementation see jupyter notebook for exploration work
bcfd4e6
@DonaldChung-HK
add pathos to requirement and removed dask from core implementation
62f5976
@DonaldChung-HK
fixed docs and added community guidelines
79c44ef
@DonaldChung-HK
added developer guide
bd4ea8c
@DonaldChung-HK
remove pdf and added trial dask implementation
6962489
@DonaldChung-HK
fixed documentation on need to output both force and coordinate to th…
b4d723b 
…e same file
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codecov-commenter commented Aug 10, 2022

Codecov Report

Merging #8 (b4d723b) into main (8c1d9bf) will increase coverage by 0.03%.
The diff coverage is 20.93%.

@jimboid jimboid deleted the dask_july22 branch January 31, 2025 14:44
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@DonaldChung-HK @codecov-commenter