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Pull requests: DataBiosphere/toil

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Pull requests list

Support singularity:// protocol for WDL container
#5436 opened Jan 13, 2026 by adamnovak Loading…
19 tasks
Improve Slurm time parsing
#5434 opened Jan 9, 2026 by adamnovak Loading…
19 tasks
use subtests from pytest 9.x
#5430 opened Jan 7, 2026 by mr-c Loading…
19 tasks
Avoid duplicating PATH
#5425 opened Jan 2, 2026 by mnijhuis-tos Loading…
19 tasks
Update astroid requirement from <4,>=3 to >=3,<5 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#5424 opened Dec 18, 2025 by dependabot bot Loading…
Let Python workflows steal the --config option name
#5420 opened Dec 11, 2025 by adamnovak Loading…
19 tasks
Update kubernetes requirement from <34,>=12.0.1 to >=12.0.1,<35 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#5397 opened Sep 30, 2025 by dependabot bot Loading…
Add script to clean up quay.io.
#3772 opened Sep 9, 2021 by DailyDreaming Draft
19 tasks
CWL job chaining tests
#3696 opened Jul 2, 2021 by douglowe Loading…
19 tasks
Add disk usage log message at start of Toil run.
#3516 opened Mar 27, 2021 by DailyDreaming Loading…
19 tasks
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