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Added word size argument to blastn query in readme #39

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Added word size argument to blastn query in readme #39

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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -74,7 +74,7 @@ You will need to format the output in XML format in order to use the clermontypi

```
% makeblastdb -in my_fasta.fasta -input_type fasta -out my_fasta -dbtype nucl
% blastn -query ./data/primers.fasta -perc_identity 90 -task blastn -outfmt 5 -db my_fasta -out my_fasta.xml
% blastn -query ./data/primers.fasta -perc_identity 90 -task blastn -word_size 6 -outfmt 5 -db my_fasta -out my_fasta.xml
```
#### Clermontyping launch

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