Where can I find the docs for `newick_utils`?

[corneliusroemer]

This seems to be a useful tool, in fact chatgpt suggested it to me when I asked How can I midpoint root a nwk tree? are there cli tools for that?

It's also easy to install via brew install newick_utils from brewsci/bio. However, I haven't been able to locate the docs. Could you help me find them? Thanks!

[corneliusroemer]

This link from here https://bio.tools/newick_utilities gets redirected to somewhere where there are no docs, just forwards to github repo.

Link: http://cegg.unige.ch/pub/nwutils_tutorial-1.6.pdf gets forwarded to https://www.ezlab.org/#newick-utils

[corneliusroemer]

Ooh, I found them on wayback machine archived: https://web.archive.org/web/20161206034316/http://cegg.unige.ch/pub/nwutils_tutorial-1.6.pdf

[corneliusroemer]

Found them also here in the repo, just tricky to find among hundreds of files in the doc folder:

• https://github.com/tjunier/newick_utils/blob/master/doc/manual.pdf
• https://github.com/tjunier/newick_utils/blob/master/doc/nwutils_tutorial.pdf
• https://github.com/tjunier/newick_utils/blob/master/doc/trim_1.pdf