- Download the following file
https://download.geofabrik.de/russia/northwestern-fed-district-latest.osm.pbf
- Clip by polygon
osmconvert -v ./northwestern-fed-district-latest.osm.pbf -B=Russia_Nenets_Autonomous_Okrug.poly --complete-ways -o=nenetsconv.osm.pbf
- The output pbf contains geometries outside the original polygon, see the highlighted geometries in yellow.

nenetsconv.zip
Russia_Nenets_Autonomous_Okrug.txt
osmconvert --help
osmconvert 0.8.7